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  • This R project provides two scripted examples of the methods executed in Schaffer-Smith et al. 2018.
    Quantifying shorebird habitat in managed wetlands by modeling shallow water depth dynamics. Ecological Applications.

    1) "Figure3_example_water_depth_volume_optimal_habitat_distributions_sact41c1" provides the code used to generate components of Figure 3.

    2) "Figure7_example_historical_flood_depth_habitat_distributions_sact41c1" provides the code used to generate components of Figure 7.

    NOTES:
    Additional data from another part of the Duke Digital Repository is required to execute the Figure 7 script.
    The water extent time series maps referenced in this script can be found under Spring Water/non-water extent in the Sacramento Valley of California 1983-2015 > single_date_water_extent_maps.zip.

    Methods used to produce water extent maps are described in Schaffer-Smith et al. 2017.Three decades of Landsat-derived spring surface water dynamics in an agricultural wetland mosaic; Implications for migratory shorebirds. Remote Sensing of Environment ... [Read More]

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